Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: ST3GAL5 ENSPTRG00000012146

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Description

ST3 beta-galactoside alpha-2,3-sialyltransferase 5 [Source:VGNC Symbol;Acc:VGNC:10300]

Location

Chromosome 2A: 87,554,139-87,620,238 reverse strand.

Pan_tro_3.0:CM000315.3

About this gene

This gene has 6 transcripts (splice variants), 197 orthologues and 14 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000088439.1	ST3GAL5-206	1314	437aa	ENSPTRP00000087081.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TD04 A0A6D2WEZ5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSPTRT00000096179.1	ST3GAL5-201	3503	390aa	ENSPTRP00000085067.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2J8L5R8 A0A6D2X7K0	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSPTRT00000022576.3	ST3GAL5-202	2383	418aa	ENSPTRP00000020834.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2W5D9 K7AGV5	APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000099210.1	ST3GAL5-203	2236	365aa	ENSPTRP00000080429.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3STT2 A0A6D2W7N5	-
ENSPTRT00000100079.1	ST3GAL5-205	1308	435aa	ENSPTRP00000075969.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SG00	-
ENSPTRT00000079995.1	ST3GAL5-204	1188	395aa	ENSPTRP00000074505.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SBS8 A0A6D2XM15	-

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Summary

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