Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: APOC1 ENSPTRG00000011128

.

Description

apolipoprotein C1 [Source:VGNC Symbol;Acc:VGNC:10193]

Location

Chromosome 19: 47,007,839-47,014,212 forward strand.

Pan_tro_3.0:CM000333.3

About this gene

This gene has 4 transcripts (splice variants), 54 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000092823.1	APOC1-203	390	130aa	ENSPTRP00000070626.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3S0Y0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSPTRT00000046577.4	APOC1-201	700	83aa	ENSPTRP00000043051.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A663D5T2 K7C9T7 P0CE38	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSPTRT00000092584.1	APOC1-204	390	129aa	ENSPTRP00000091923.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TRS5 A0A6D2YBR1	-
ENSPTRT00000099936.1	APOC1-202	252	83aa	ENSPTRP00000081430.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SWP8 A0A6D2XHI7	-

.

Summary

.

.