Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: ZNF546 ENSPTRG00000010987

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Description

zinc finger protein 546 [Source:VGNC Symbol;Acc:VGNC:58070]

Location

Chromosome 19: 41,991,607-42,012,676 forward strand.

Pan_tro_3.0:CM000333.3

About this gene

This gene has 3 transcripts (splice variants), 46 orthologues and 197 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000077970.1	ZNF546-201	4562	836aa	ENSPTRP00000082392.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SZM0 A0A6D2WS12	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000020367.5	ZNF546-203	2430	809aa	ENSPTRP00000018841.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2QGB9	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSPTRT00000092251.1	ZNF546-202	114	37aa	ENSPTRP00000067894.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RTD9 A0A6D2WHD7	-

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Summary

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