Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
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ID History
- Gene history

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Gene: CCBE1 ENSPTRG00000010062

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Description

collagen and calcium binding EGF domains 1 [Source:VGNC Symbol;Acc:VGNC:51949]

Location

Chromosome 18: 56,868,784-57,139,003 reverse strand.

Pan_tro_3.0:CM000332.3

About this gene

This gene has 3 transcripts (splice variants) and 185 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000018455.4	CCBE1-203	1221	406aa	ENSPTRP00000017095.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2WES1 H2QEL8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSPTRT00000104608.1	CCBE1-201	5993	336aa	ENSPTRP00000088873.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TI09 A0A6D2W0I1	-
ENSPTRT00000092953.1	CCBE1-202	1080	359aa	ENSPTRP00000080938.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SWH5	-

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Summary

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