transcription factor 4 [Source:VGNC Symbol;Acc:VGNC:13292]
Chromosome 18: 52,585,238-52,997,748 reverse strand.
Pan_tro_3.0:CM000332.3
This gene has 10 transcripts (splice variants), 213 orthologues and 2 paralogues.
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | UniProt Match | Flags |
|---|---|---|---|---|---|---|---|
| ENSPTRT00000047273.5 | TCF4-206 | 2322 | 773aa | ENSPTRP00000040814.5 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A6D2WLJ9 H2R0J5 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5, |
| ENSPTRT00000106553.1 | TCF4-203 | 7512 | 511aa | ENSPTRP00000071849.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A2I3S5L1 A0A6D2YCG5 | APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1, |
| ENSPTRT00000087328.1 | TCF4-204 | 7247 | 507aa | ENSPTRP00000089141.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A2I3TIR2 A0A6D2Y3D1 | - |
| ENSPTRT00000079167.1 | TCF4-202 | 6741 | 600aa | ENSPTRP00000070585.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A2I3S161 A0A6D2VWJ9 | - |
| ENSPTRT00000100753.1 | TCF4-201 | 6710 | 625aa | ENSPTRP00000075349.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A2I3SFT1 A0A6D2WZ83 | - |
| ENSPTRT00000079011.1 | TCF4-205 | 2415 | 681aa | ENSPTRP00000082603.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A2I3T178 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| ENSPTRT00000080242.1 | TCF4-207 | 1995 | 664aa | ENSPTRP00000086795.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A2I3TC50 A0A6D2WFH7 | - |
| ENSPTRT00000079914.1 | TCF4-208 | 1896 | 631aa | ENSPTRP00000068213.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A2I3RV81 A0A6D2X730 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| ENSPTRT00000109490.1 | TCF4-209 | 1836 | 611aa | ENSPTRP00000089601.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A2I3TK52 A0A6D2Y160 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| ENSPTRT00000076434.1 | TCF4-210 | 1704 | 567aa | ENSPTRP00000079904.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A2I3SSH8 | - |
