Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Cellular component
- GO: Biological process
- GO: Molecular function
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: CNTNAP1 ENSPTRG00000009216

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Description

contactin associated protein 1 [Source:VGNC Symbol;Acc:VGNC:9240]

Location

Chromosome 17: 14,865,323-14,881,641 reverse strand.

Pan_tro_3.0:CM000331.3

About this gene

This gene has 2 transcripts (splice variants), 122 orthologues and 34 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000016951.5	CNTNAP1-201	5488	1384aa	ENSPTRP00000053077.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2VU06 H2R9Q6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSPTRT00000108716.1	CNTNAP1-202	2037	678aa	ENSPTRP00000085094.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3T776	-

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Summary

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