Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: RARA ENSPTRG00000009120

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Description

retinoic acid receptor alpha [Source:VGNC Symbol;Acc:VGNC:9556]

Location

Chromosome 17: 17,250,144-17,289,591 reverse strand.

Pan_tro_3.0:CM000331.3

About this gene

This gene has 7 transcripts (splice variants), 330 orthologues and 18 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000016797.4	RARA-202	1875	624aa	ENSPTRP00000053041.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2R9N8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSPTRT00000081317.1	RARA-201	3400	462aa	ENSPTRP00000079369.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2J8KGL7 A0A6D2XJ34	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSPTRT00000098225.1	RARA-205	1437	478aa	ENSPTRP00000078309.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SMQ3 A0A6D2W242	-
ENSPTRT00000090823.1	RARA-204	1299	432aa	ENSPTRP00000085968.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3T9U9	-
ENSPTRT00000079698.1	RARA-203	1107	368aa	ENSPTRP00000084789.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3T6B9	-
ENSPTRT00000100833.1	RARA-206	1098	365aa	ENSPTRP00000069051.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RWF5 A0A6D2W6F6	-
ENSPTRT00000104355.1	RARA-207	966	321aa	ENSPTRP00000086595.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TBJ9	-

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Summary

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