Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: LHX1 ENSPTRG00000009050

.

Description

LIM homeobox 1 [Source:VGNC Symbol;Acc:VGNC:12402]

Location

Chromosome 17: 20,523,722-20,528,658 reverse strand.

Pan_tro_3.0:CM000331.3

About this gene

This gene has 1 transcript (splice variant), 126 orthologues and 21 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000061998.4	LHX1-201	1221	406aa	ENSPTRP00000054548.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2J8LJQ5 Q5IS44	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

.

Summary

.

.