Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: CNOT1 ENSPTRG00000008183

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Description

CCR4-NOT transcription complex subunit 1 [Source:VGNC Symbol;Acc:VGNC:5742]

Location

Chromosome 16: 49,209,922-49,320,157 reverse strand.

Pan_tro_3.0:CM000330.3

About this gene

This gene has 3 transcripts (splice variants) and 214 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000015088.3	CNOT1-201	8480	2383aa	ENSPTRP00000013973.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2QB87	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSPTRT00000102261.1	CNOT1-202	6981	2326aa	ENSPTRP00000085395.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3T815	-
ENSPTRT00000105435.1	CNOT1-203	291	96aa	ENSPTRP00000083744.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3T3E3 A0A6D2WDR9	-

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Summary

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