Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: CX3CL1 ENSPTRG00000008153

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Description

C-X3-C motif chemokine ligand 1 [Source:VGNC Symbol;Acc:VGNC:7411]

Location

Chromosome 16: 48,050,350-48,065,286 forward strand.

Pan_tro_3.0:CM000330.3

About this gene

This gene has 2 transcripts (splice variants), 164 orthologues and 29 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000015032.6	CX3CL1-202	3331	397aa	ENSPTRP00000013920.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2X6W9 H2QB68	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSPTRT00000106765.1	CX3CL1-201	3286	55aa	ENSPTRP00000088891.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TI00 A0A6D2Y3P9	-

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Summary

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