Summary
- Splice variants
- Transcript comparison
- Gene alleles
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Comparative Genomics
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Genetic Variation
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Gene: TEX9 ENSPTRG00000007105

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Description

testis expressed 9 [Source:VGNC Symbol;Acc:VGNC:1602]

Location

Chromosome 15: 37,183,953-37,249,803 forward strand.

Pan_tro_3.0:CM000329.3

About this gene

This gene has 3 transcripts (splice variants) and 201 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000013110.2	TEX9-203	1077	358aa	ENSPTRP00000012143.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2Q9H6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000104745.1	TEX9-202	3802	316aa	ENSPTRP00000065172.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RKH9 A0A6D2XXC5	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSPTRT00000085529.1	TEX9-201	3669	102aa	ENSPTRP00000072135.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3S564 A0A6D2W1D3	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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