Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: BCL11B ENSPTRG00000006707

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Description

BCL11 transcription factor B [Source:VGNC Symbol;Acc:VGNC:57946]

Location

Chromosome 14: 84,391,583-84,494,743 reverse strand.

Pan_tro_3.0:CM000328.3

About this gene

This gene has 5 transcripts (splice variants), 192 orthologues and 15 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000049672.4	BCL11B-201	8742	894aa	ENSPTRP00000052505.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2WRB3 H2R971	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000109652.1	BCL11B-202	8529	823aa	ENSPTRP00000065853.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2J8QM98 A0A6D2W1K8	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSPTRT00000096871.1	BCL11B-203	2598	865aa	ENSPTRP00000080055.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SU12	-
ENSPTRT00000100282.1	BCL11B-204	2565	854aa	ENSPTRP00000077932.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SLP5	-
ENSPTRT00000099415.1	BCL11B-205	2103	700aa	ENSPTRP00000065105.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RKC5	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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