Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: NFATC4 ENSPTRG00000006218

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Description

nuclear factor of activated T cells 4 [Source:VGNC Symbol;Acc:VGNC:9161]

Location

Chromosome 14: 8,058,971-8,071,657 forward strand.

Pan_tro_3.0:CM000328.3

About this gene

This gene has 5 transcripts (splice variants), 181 orthologues and 4 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000082647.1	NFATC4-203	2802	933aa	ENSPTRP00000089263.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TJ60 A0A6D2WYU1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000011410.4	NFATC4-201	4935	901aa	ENSPTRP00000010557.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2WVE3 K7DGW1	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSPTRT00000085129.1	NFATC4-205	4856	889aa	ENSPTRP00000070587.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3S0W8 A0A6D2Y637	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSPTRT00000106194.1	NFATC4-202	2745	914aa	ENSPTRP00000075715.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SFF8 A0A6D2XKG8	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSPTRT00000109888.1	NFATC4-204	1587	528aa	ENSPTRP00000063194.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3REV0	-

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Summary

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