Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: COL4A1 ENSPTRG00000006031

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Description

collagen type IV alpha 1 chain [Source:VGNC Symbol;Acc:VGNC:10713]

Location

Chromosome 13: 95,971,123-96,136,914 reverse strand.

Pan_tro_3.0:CM000327.3

About this gene

This gene has 3 transcripts (splice variants), 189 orthologues and 38 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000096352.1	COL4A1-201	6529	1669aa	ENSPTRP00000091362.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2XL77 K7C8P4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSPTRT00000011070.4	COL4A1-202	4722	1573aa	ENSPTRP00000010247.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2Q7S9	-
ENSPTRT00000096979.1	COL4A1-203	1560	519aa	ENSPTRP00000083211.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3T1V8 A0A6D2WM12	-

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Summary

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