Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SMAD9 ENSPTRG00000005788

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Description

SMAD family member 9 [Source:VGNC Symbol;Acc:VGNC:5111]

Location

Chromosome 13: 21,615,637-21,652,751 reverse strand.

Pan_tro_3.0:CM000327.3

About this gene

This gene has 6 transcripts (splice variants), 67 orthologues and 7 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000066103.3	SMAD9-201	5977	467aa	ENSPTRP00000057678.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2VUD5 H2RCQ5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSPTRT00000099250.1	SMAD9-202	5853	430aa	ENSPTRP00000063548.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2WYB5 K7BDF3	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSPTRT00000084034.1	SMAD9-203	3760	344aa	ENSPTRP00000088180.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TFZ0	-
ENSPTRT00000093119.1	SMAD9-204	3308	381aa	ENSPTRP00000090025.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TLB6	-
ENSPTRT00000089967.1	SMAD9-205	1392	463aa	ENSPTRP00000091567.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TQT3	-
ENSPTRT00000097907.1	SMAD9-206	1359	452aa	ENSPTRP00000084182.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3T5Q0	-

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Summary

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