Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
- GO: Cellular component
- GO: Molecular function
- GO: Biological process
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: VPS29 ENSPTRG00000005442

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Description

VPS29 retromer complex component [Source:VGNC Symbol;Acc:VGNC:8591]

Location

Chromosome 12: 113,535,242-113,550,064 reverse strand.

Pan_tro_3.0:CM000326.3

About this gene

This gene has 4 transcripts (splice variants) and 212 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000107418.1	VPS29-203	645	214aa	ENSPTRP00000083582.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2J8MYW9 A0A6D2WKC7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSPTRT00000101166.1	VPS29-201	1407	181aa	ENSPTRP00000087105.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TCY6	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSPTRT00000064070.2	VPS29-202	1127	182aa	ENSPTRP00000055616.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2RBF6	-
ENSPTRT00000077939.1	VPS29-204	561	186aa	ENSPTRP00000067004.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2XTG2 K7CCL1	-

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Summary

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