Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: TFCP2 ENSPTRG00000004949

.

Description

transcription factor CP2 [Source:VGNC Symbol;Acc:VGNC:5620]

Location

Chromosome 12: 38,666,800-38,755,801 forward strand.

Pan_tro_3.0:CM000326.3

About this gene

This gene has 6 transcripts (splice variants), 215 orthologues and 5 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000106648.1	TFCP2-201	3717	502aa	ENSPTRP00000068811.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RVQ9 A0A6D2WBW6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSPTRT00000078356.1	TFCP2-206	3732	118aa	ENSPTRP00000075655.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SF97	-
ENSPTRT00000107579.1	TFCP2-202	3561	450aa	ENSPTRP00000083732.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3T3B1 A0A6D2WHE7	-
ENSPTRT00000105117.1	TFCP2-203	3483	424aa	ENSPTRP00000061983.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RBJ5 A0A6D2WEC2	-
ENSPTRT00000009142.4	TFCP2-205	1455	484aa	ENSPTRP00000008451.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2Q5X6	-
ENSPTRT00000107223.1	TFCP2-204	843	280aa	ENSPTRP00000093829.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TX86	-

.

Summary

.

.