Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Cellular component
- GO: Molecular function
- GO: Biological process
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: ATF1 ENSPTRG00000004941

.

Description

activating transcription factor 1 [Source:VGNC Symbol;Acc:VGNC:12788]

Location

Chromosome 12: 39,029,732-39,087,431 reverse strand.

Pan_tro_3.0:CM000326.3

About this gene

This gene has 2 transcripts (splice variants), 158 orthologues and 10 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000009130.5	ATF1-201	2653	270aa	ENSPTRP00000008439.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2Y8Z8 H2Q5X1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSPTRT00000079706.1	ATF1-202	168	55aa	ENSPTRP00000077497.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SKQ9 A0A6D2XNK6	-

.

Summary

.

.