Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: ABCC9 ENSPTRG00000004764

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Description

ATP binding cassette subfamily C member 9 [Source:VGNC Symbol;Acc:VGNC:12752]

Location

Chromosome 12: 68,946,545-69,090,322 forward strand.

Pan_tro_3.0:CM000326.3

About this gene

This gene has 6 transcripts (splice variants), 229 orthologues and 14 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000089993.1	ABCC9-202	8121	1549aa	ENSPTRP00000084549.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2Y7N6 K7BCK3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000106387.1	ABCC9-201	5644	1549aa	ENSPTRP00000072667.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3S6S2 A0A6D2WIT3	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSPTRT00000066854.2	ABCC9-205	4611	1536aa	ENSPTRP00000058431.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2RD79	-
ENSPTRT00000102363.1	ABCC9-206	1464	487aa	ENSPTRP00000066808.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RR60	-
ENSPTRT00000083663.1	ABCC9-203	513	170aa	ENSPTRP00000065049.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RK30 A0A6D2Y0I1	-
ENSPTRT00000109621.1	ABCC9-204	450	149aa	ENSPTRP00000078252.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2J8QRA8 A0A6D2W5T6	-

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Summary

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