Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: CXCR5 ENSPTRG00000004355

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Description

C-X-C motif chemokine receptor 5 [Source:VGNC Symbol;Acc:VGNC:11334]

Location

Chromosome 11: 119,349,339-119,363,162 forward strand.

Pan_tro_3.0:CM000325.3

About this gene

This gene has 2 transcripts (splice variants), 184 orthologues and 21 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000082808.1	CXCR5-201	4233	372aa	ENSPTRP00000073048.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3S7U4 A0A6D2WWZ4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSPTRT00000008088.5	CXCR5-202	1107	368aa	ENSPTRP00000007465.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2Q4W8	-

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Summary

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