Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Cellular component
- GO: Biological process
- GO: Molecular function
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: CCDC90B ENSPTRG00000004129

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Description

coiled-coil domain containing 90B [Source:VGNC Symbol;Acc:VGNC:3161]

Location

Chromosome 11: 83,393,254-83,418,178 reverse strand.

Pan_tro_3.0:CM000325.3

About this gene

This gene has 3 transcripts (splice variants), 205 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000007695.4	CCDC90B-201	1640	254aa	ENSPTRP00000007100.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2XMV0 H2Q4I0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSPTRT00000090801.1	CCDC90B-202	1536	97aa	ENSPTRP00000070392.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3S0C5 A0A6D2WC46	-
ENSPTRT00000108742.1	CCDC90B-203	627	208aa	ENSPTRP00000077632.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SKU1 A0A6D2XPU2	-

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Summary

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