Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: NPAS4 ENSPTRG00000003923

.

Description

neuronal PAS domain protein 4 [Source:VGNC Symbol;Acc:VGNC:3090]

Location

Chromosome 11: 66,509,103-66,514,785 forward strand.

Pan_tro_3.0:CM000325.3

About this gene

This gene has 2 transcripts (splice variants), 215 orthologues and 7 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000007325.5	NPAS4-201	3297	802aa	ENSPTRP00000006758.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2XK94 H2Q466	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSPTRT00000088060.1	NPAS4-202	702	234aa	ENSPTRP00000085356.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2J8QBE9 A0A6D2W254	-

.

Summary

.

.