Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: USH1C ENSPTRG00000003404

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Description

USH1 protein network component harmonin [Source:VGNC Symbol;Acc:VGNC:7694]

Location

Chromosome 11: 17,325,875-17,376,337 reverse strand.

Pan_tro_3.0:CM000325.3

About this gene

This gene has 5 transcripts (splice variants), 199 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000006433.6	USH1C-202	2700	899aa	ENSPTRP00000048221.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2R5J6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSPTRT00000077758.1	USH1C-201	2244	552aa	ENSPTRP00000068840.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RX01	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSPTRT00000101367.1	USH1C-203	1647	548aa	ENSPTRP00000084619.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3T5U8	-
ENSPTRT00000081958.1	USH1C-204	1626	541aa	ENSPTRP00000076748.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SJU3	-
ENSPTRT00000106218.1	USH1C-205	1602	533aa	ENSPTRP00000072616.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3S6K2	-

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Summary

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