Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SHOC2 ENSPTRG00000002941

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Description

SHOC2 leucine rich repeat scaffold protein [Source:VGNC Symbol;Acc:VGNC:12500]

Location

Chromosome 10: 112,526,456-112,620,447 forward strand.

Pan_tro_3.0:CM000324.3

About this gene

This gene has 2 transcripts (splice variants), 202 orthologues and 34 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000005608.5	SHOC2-201	4131	582aa	ENSPTRP00000005186.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2Y003 H2Q2K4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSPTRT00000080458.1	SHOC2-202	1611	536aa	ENSPTRP00000081192.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SW36 A0A6D2XH61	-

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Summary

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