Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Cellular component
- GO: Molecular function
- GO: Biological process
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: FAM107B ENSPTRG00000002309

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Description

family with sequence similarity 107 member B [Source:VGNC Symbol;Acc:VGNC:12324]

Location

Chromosome 10: 14,929,926-15,188,658 reverse strand.

Pan_tro_3.0:CM000324.3

About this gene

This gene has 3 transcripts (splice variants), 206 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000087750.1	FAM107B-203	921	306aa	ENSPTRP00000070925.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3S1Q3 A0A6D2Y4J8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000089994.1	FAM107B-202	6882	131aa	ENSPTRP00000075373.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2J8QJF6 A0A6D2XKJ5	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSPTRT00000004235.3	FAM107B-201	5670	170aa	ENSPTRP00000003911.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2Q1N0	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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