Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: PRRX1 ENSPTRG00000001668

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Description

paired related homeobox 1 [Source:VGNC Symbol;Acc:VGNC:1473]

Location

Chromosome 1: 148,954,626-149,030,863 forward strand.

Pan_tro_3.0:CM000314.3

About this gene

This gene has 3 transcripts (splice variants), 219 orthologues and 58 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000003024.3	PRRX1-202	5067	245aa	ENSPTRP00000002776.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2WXL1 H2Q0L1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSPTRT00000003023.6	PRRX1-201	5141	217aa	ENSPTRP00000002775.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2VSZ7 H2Q0L0	-
ENSPTRT00000095964.1	PRRX1-203	420	139aa	ENSPTRP00000087231.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TDF9	-

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Summary

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