Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: TRIM46 ENSPTRG00000001411

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Description

tripartite motif containing 46 [Source:VGNC Symbol;Acc:VGNC:1702]

Location

Chromosome 1: 133,261,264-133,273,960 forward strand.

Pan_tro_3.0:CM000314.3

About this gene

This gene has 8 transcripts (splice variants), 266 orthologues and 87 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000002585.5	TRIM46-201	3492	759aa	ENSPTRP00000002377.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2VYI5 H2Q071	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSPTRT00000103475.1	TRIM46-202	3552	736aa	ENSPTRP00000083412.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3T2F4 A0A6D2X1X9	-
ENSPTRT00000110260.1	TRIM46-208	2241	746aa	ENSPTRP00000090141.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TLL8 A0A6D2W115	-
ENSPTRT00000088363.1	TRIM46-206	1818	605aa	ENSPTRP00000092022.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TS28	-
ENSPTRT00000082304.1	TRIM46-204	1656	551aa	ENSPTRP00000080458.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SU26 A0A6D2WI67	-
ENSPTRT00000094328.1	TRIM46-207	1626	541aa	ENSPTRP00000069062.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RWR3	-
ENSPTRT00000100235.1	TRIM46-203	1497	498aa	ENSPTRP00000074391.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SBN6 A0A6D2VT86	-
ENSPTRT00000097303.1	TRIM46-205	1329	442aa	ENSPTRP00000066039.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RMW9	-

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Summary

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