Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: DCST1 ENSPTRG00000001403

.

Description

DC-STAMP domain containing 1 [Source:VGNC Symbol;Acc:VGNC:6776]

Location

Chromosome 1: 133,121,392-133,138,512 forward strand.

Pan_tro_3.0:CM000314.3

About this gene

This gene has 4 transcripts (splice variants), 178 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000002569.4	DCST1-202	2299	706aa	ENSPTRP00000002361.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2X116 H2Q064	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000110597.1	DCST1-201	2262	664aa	ENSPTRP00000083754.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3T3F3 A0A6D2W2V4	-
ENSPTRT00000110911.1	DCST1-203	2046	681aa	ENSPTRP00000075283.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SE67 A0A6D2YA12	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSPTRT00000108215.1	DCST1-204	792	263aa	ENSPTRP00000081356.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SWM8	-

.

Summary

.

.