Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: VTCN1 ENSPTRG00000001164

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Description

V-set domain containing T cell activation inhibitor 1 [Source:VGNC Symbol;Acc:VGNC:1723]

Location

Chromosome 1: 118,587,469-118,655,495 forward strand.

Pan_tro_3.0:CM000314.3

About this gene

This gene has 4 transcripts (splice variants), 192 orthologues and 17 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000090606.1	VTCN1-204	858	285aa	ENSPTRP00000066041.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RMV9 A0A6D2VWF4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSPTRT00000044967.5	VTCN1-201	2629	282aa	ENSPTRP00000044822.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2VYV1 H2R332	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSPTRT00000089048.1	VTCN1-203	501	166aa	ENSPTRP00000062594.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RD40 A0A6D2WY59	-
ENSPTRT00000058857.4	VTCN1-202	264	87aa	ENSPTRP00000065458.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RLD0 A0A6D2X4G8	-

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Summary

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