nuclear factor I A [Source:VGNC Symbol;Acc:VGNC:10004]
Chromosome 1: 60,711,272-61,315,918 forward strand.
Pan_tro_3.0:CM000314.3
This gene has 8 transcripts (splice variants), 223 orthologues and 3 paralogues.
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | UniProt Match | Flags |
|---|---|---|---|---|---|---|---|
| ENSPTRT00000059144.5 | NFIA-203 | 1665 | 554aa | ENSPTRP00000052250.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A6D2XWP8 H2R915 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, |
| ENSPTRT00000100478.1 | NFIA-201 | 1599 | 532aa | ENSPTRP00000071626.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A2I3S469 A0A6D2VZ70 | APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5, |
| ENSPTRT00000101089.1 | NFIA-202 | 1506 | 501aa | ENSPTRP00000066963.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A2I3RQL8 A0A6D2VSF2 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| ENSPTRT00000089289.1 | NFIA-204 | 1497 | 498aa | ENSPTRP00000066017.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A6D2XN37 K7ASW7 | APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1, |
| ENSPTRT00000079493.1 | NFIA-205 | 1464 | 487aa | ENSPTRP00000087568.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A2I3TEE2 A0A6D2WCE4 | - |
| ENSPTRT00000091056.1 | NFIA-206 | 1401 | 466aa | ENSPTRP00000082551.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A2I3SZY2 A0A6D2WAM4 | - |
| ENSPTRT00000078105.1 | NFIA-207 | 1143 | 380aa | ENSPTRP00000079054.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A2I3SPU6 A0A6D2VTW3 | - |
| ENSPTRT00000108657.1 | NFIA-208 | 513 | 170aa | ENSPTRP00000080608.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A2I3SUE3 | - |
