Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: CAMTA1 ENSPTRG00000000096

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Description

calmodulin binding transcription activator 1 [Source:VGNC Symbol;Acc:VGNC:11302]

Location

Chromosome 1: 6,066,668-7,049,258 forward strand.

Pan_tro_3.0:CM000314.3

About this gene

This gene has 6 transcripts (splice variants), 211 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000000227.5	CAMTA1-202	5022	1673aa	ENSPTRP00000000189.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2WAK1 H2PXX5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSPTRT00000098424.1	CAMTA1-206	3893	237aa	ENSPTRP00000092907.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TV95 A0A6D2X8Z6	-
ENSPTRT00000098088.1	CAMTA1-201	984	101aa	ENSPTRP00000086682.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2X1P0 K7BV96	-
ENSPTRT00000105475.1	CAMTA1-204	300	99aa	ENSPTRP00000088930.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TJ70	-
ENSPTRT00000095297.1	CAMTA1-203	279	92aa	ENSPTRP00000062147.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RBV1 A0A6D2Y5U1	-
ENSPTRT00000099280.1	CAMTA1-205	258	85aa	ENSPTRP00000084227.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3T5U6	-

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Summary

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