Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
- GO: Molecular function
- GO: Cellular component
- GO: Biological process
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: VPS53 ENSPPYG00000007757

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Description

VPS53 subunit of GARP complex [Source:NCBI gene (formerly Entrezgene);Acc:100173757]

Location

Primary_assembly 17: 334,517-514,035 reverse strand.

Susie_PABv2:CM009279.2

About this gene

This gene has 5 transcripts (splice variants) and 217 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPPYT00000009098.2	VPS53-203	4505	832aa	ENSPPYP00000008741.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2NS34 Q5R5J4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSPPYT00000047160.1	VPS53-204	4394	803aa	ENSPPYP00000045303.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5U5H0	-
ENSPPYT00000050935.1	VPS53-202	4340	817aa	ENSPPYP00000037146.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5TKQ7	-
ENSPPYT00000038891.1	VPS53-205	1508	422aa	ENSPPYP00000025516.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2J8SNI9	-
ENSPPYT00000052718.1	VPS53-201	569	145aa	ENSPPYP00000026493.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2J8SNJ8	-

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Summary

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