Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Biological process
- GO: Molecular function
- GO: Cellular component
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: COL13A1 ENSPPAG00000043840

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Description

collagen type XIII alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2190]

Location

Chromosome 10: 68,807,425-68,963,642 forward strand.

panpan1.1:CM003393.1

About this gene

This gene has 6 transcripts (splice variants), 147 orthologues and 36 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPPAT00000065559.1	COL13A1-201	2154	717aa	ENSPPAP00000042629.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R9CKY3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSPPAT00000065560.1	COL13A1-202	2088	695aa	ENSPPAP00000042630.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R9CKW4	-
ENSPPAT00000065562.1	COL13A1-203	2061	686aa	ENSPPAP00000042632.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R9CSW4	-
ENSPPAT00000065564.1	COL13A1-204	2007	668aa	ENSPPAP00000042634.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R9CKY7	-
ENSPPAT00000065566.1	COL13A1-205	1938	645aa	ENSPPAP00000042636.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R9CL07	-
ENSPPAT00000065568.1	COL13A1-206	1833	610aa	ENSPPAP00000042638.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R9CN97	-

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Summary

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