Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: col2a1a ENSORLG00000012738

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Description

collagen, type II, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-980526-192]

Location

Primary_assembly 7: 19,315,096-19,335,375 forward strand.

ASM223467v1:CP020671.1

About this gene

This gene has 5 transcripts (splice variants), 192 orthologues and 56 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSORLT00000015982.2	col2a1a-201	4470	1489aa	ENSORLP00000015981.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2MBQ6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSORLT00000041860.1	col2a1a-202	4344	1447aa	ENSORLP00000037117.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3B3HZU3	-
ENSORLT00000035728.1	col2a1a-203	4263	1420aa	ENSORLP00000041829.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3B3ICN5	-
ENSORLT00000032036.1	col2a1a-204	4113	1370aa	ENSORLP00000027395.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3B3H7A0	-
ENSORLT00000035880.1	col2a1a-205	4104	1367aa	ENSORLP00000042390.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3B3IE81	-

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Summary

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