Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: cdx1a ENSONIG00000013073

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Description

caudal type homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-050510-1]

Location

Primary_assembly LG2: 25,203,933-25,209,517 reverse strand.

O_niloticus_UMD_NMBU:CM007482.2

About this gene

This gene has 2 transcripts (splice variants), 105 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSONIT00000016457.2	cdx1a-202	729	242aa	ENSONIP00000016442.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	I3K5P7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSONIT00000045324.1	cdx1a-201	369	122aa	ENSONIP00000038244.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A669BR77	-

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Summary

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