Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: clstn2 ENSONIG00000010418

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Description

calsyntenin 2 [Source:ZFIN;Acc:ZDB-GENE-070911-2]

Location

Primary_assembly LG18: 11,878,150-12,023,747 reverse strand.

O_niloticus_UMD_NMBU:CM007499.2

About this gene

This gene has 10 transcripts (splice variants), 209 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSONIT00000066238.1	clstn2-201	4448	1026aa	ENSONIP00000029137.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSONIT00000039000.1	clstn2-202	2958	863aa	ENSONIP00000035431.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSONIT00000034505.1	clstn2-206	2859	952aa	ENSONIP00000052087.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSONIT00000070031.1	clstn2-207	2847	948aa	ENSONIP00000075273.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSONIT00000013106.2	clstn2-208	2814	937aa	ENSONIP00000013096.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	I3JW51	-
ENSONIT00000050484.1	clstn2-203	2799	932aa	ENSONIP00000031305.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSONIT00000013105.2	clstn2-204	2784	927aa	ENSONIP00000013095.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	I3JW50	-
ENSONIT00000049495.1	clstn2-209	2766	921aa	ENSONIP00000043635.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSONIT00000054948.1	clstn2-205	2706	901aa	ENSONIP00000044898.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSONIT00000051076.1	clstn2-210	2694	897aa	ENSONIP00000054451.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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