Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Cellular component
- GO: Molecular function
- GO: Biological process
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: shmt1 ENSONIG00000008491

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Description

serine hydroxymethyltransferase 1 (soluble) [Source:ZFIN;Acc:ZDB-GENE-040426-1558]

Location

Primary_assembly LG4: 10,421,479-10,426,932 forward strand.

O_niloticus_UMD_NMBU:CM007485.2

About this gene

This gene has 5 transcripts (splice variants), 214 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSONIT00000065103.1	shmt1-201	1768	561aa	ENSONIP00000078267.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSONIT00000090615.1	shmt1-202	1654	503aa	ENSONIP00000079589.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSONIT00000037955.1	shmt1-205	1582	499aa	ENSONIP00000045203.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSONIT00000077179.1	shmt1-203	1537	484aa	ENSONIP00000054864.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSONIT00000010680.2	shmt1-204	1411	442aa	ENSONIP00000010671.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	I3JP77	-

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Summary

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