Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SHOC1 ENSOCUG00000016284

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Description

shortage in chiasmata 1 [Source:HGNC Symbol;Acc:HGNC:26535]

Location

Chromosome 1: 1,515,969-1,616,043 forward strand.

OryCun2.0:CM000790.1

About this gene

This gene has 3 transcripts (splice variants) and 135 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSOCUT00000016295.4	SHOC1-201	4539	1470aa	ENSOCUP00000014009.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G1TBC2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSOCUT00000047993.1	SHOC1-202	4143	1380aa	ENSOCUP00000041138.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSOCUT00000061757.1	SHOC1-203	4038	1345aa	ENSOCUP00000031861.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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