Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Biological process
- GO: Cellular component
- GO: Molecular function
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: PRDM1 ENSOCUG00000015495

.

Description

PR/SET domain 1 [Source:HGNC Symbol;Acc:HGNC:9346]

Location

Chromosome 12: 94,204,287-94,373,927 forward strand.

OryCun2.0:CM000801.1

About this gene

This gene has 5 transcripts (splice variants), 210 orthologues and 33 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSOCUT00000046045.1	PRDM1-202	3221	889aa	ENSOCUP00000027446.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5F9C1H9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSOCUT00000053179.1	PRDM1-205	4056	846aa	ENSOCUP00000030499.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5F9CAG7	-
ENSOCUT00000034074.2	PRDM1-201	3499	832aa	ENSOCUP00000027123.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	U3KPG3	-
ENSOCUT00000043913.1	PRDM1-203	3092	846aa	ENSOCUP00000046667.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5F9DK17	-
ENSOCUT00000015492.3	PRDM1-204	2463	820aa	ENSOCUP00000013310.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G1T9J9	-

.

Summary

.

.