Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: COL2A1 ENSOCUG00000013629

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Description

collagen type II alpha 1 chain [Source:NCBI gene (formerly Entrezgene);Acc:100009005]

Location

Scaffold GL018949: 72,110-94,586 reverse strand.

About this gene

This gene has 2 transcripts (splice variants), 244 orthologues and 35 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSOCUT00000013661.4	COL2A1-201	5114	1487aa	ENSOCUP00000011756.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G1T5V9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSOCUT00000034561.1	COL2A1-202	4907	1418aa	ENSOCUP00000035945.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5F9CQD0	-

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Summary

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