Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: COL1A1 ENSOCUG00000012881

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Description

collagen type I alpha 1 chain [Source:UniProtKB Gene Name;Acc:A0A5F9CXB0]

Location

Chromosome 19: 37,474,785-37,489,593 forward strand.

OryCun2.0:CM000808.1

About this gene

This gene has 4 transcripts (splice variants), 187 orthologues and 35 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSOCUT00000012892.3	COL1A1-202	4047	1348aa	ENSOCUP00000011096.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G1T4A5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSOCUT00000034642.1	COL1A1-201	3869	1073aa	ENSOCUP00000035611.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5F9CPN0	-
ENSOCUT00000042031.1	COL1A1-203	3726	1241aa	ENSOCUP00000038455.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5F9CXB0	-
ENSOCUT00000062351.1	COL1A1-204	2806	922aa	ENSOCUP00000038049.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5F9CXS8	-

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Summary

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