Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: VPS39 ENSOCUG00000011154

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Description

VPS39 subunit of HOPS complex [Source:HGNC Symbol;Acc:HGNC:20593]

Location

Chromosome 17: 29,966,444-30,020,871 forward strand.

OryCun2.0:CM000806.1

About this gene

This gene has 2 transcripts (splice variants), 209 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSOCUT00000026631.3	VPS39-201	4270	885aa	ENSOCUP00000023983.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G1U3M0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSOCUT00000011159.4	VPS39-202	4237	874aa	ENSOCUP00000009601.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G1T0R4	-

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Summary

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