Transcript: ENSMUST00000344159.1 Etaa1os-212

Description

Ewing tumor-associated antigen 1, opposite strand [Source:MGI Symbol;Acc:MGI:1920221]

Gene Synonyms

2900053O20Rik, 4930542E09Rik

Location

Chromosome 11: 17,903,956-17,909,577 forward strand.

About this transcript

This transcript has 4 exons, is associated with 988 variant alleles and maps to 35 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000086468.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000344152.1	Etaa1os-205	627	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENSMUST00000148496.4	Etaa1os-202	2506	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000344154.1	Etaa1os-207	1166	No protein	-	lncRNA	-
ENSMUST00000344155.1	Etaa1os-208	1148	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000140161.4	Etaa1os-201	1147	No protein	-	lncRNA	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000344165.1	Etaa1os-218	1060	No protein	-	lncRNA	-
ENSMUST00000344156.1	Etaa1os-209	1020	No protein	-	lncRNA	-
ENSMUST00000246065.2	Etaa1os-204	988	No protein	-	lncRNA	-
ENSMUST00000344167.1	Etaa1os-220	884	No protein	-	lncRNA	-
ENSMUST00000344160.1	Etaa1os-213	852	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000344162.1	Etaa1os-215	731	No protein	-	lncRNA	-
ENSMUST00000344161.1	Etaa1os-214	718	No protein	-	lncRNA	-
ENSMUST00000245969.2	Etaa1os-203	696	No protein	-	lncRNA	-
ENSMUST00000344159.1	Etaa1os-212	665	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000344166.1	Etaa1os-219	647	No protein	-	lncRNA	-
ENSMUST00000344153.1	Etaa1os-206	601	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000344158.1	Etaa1os-211	547	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000344163.1	Etaa1os-216	469	No protein	-	lncRNA	-
ENSMUST00000344157.1	Etaa1os-210	402	No protein	-	lncRNA	-
ENSMUST00000344164.1	Etaa1os-217	302	No protein	-	lncRNA	-
ENSMUST00000344168.1	Etaa1os-221	155	No protein	-	lncRNA	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 665 bps,

Version

ENSMUST00000344159.1

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000344159.1 Etaa1os-212

Summary

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Transcript: ENSMUST00000344159.1 Etaa1os-212

Summary

About Us

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