Transcript: ENSMUST00000270147.1 Gm7160-216

Description

predicted gene 7160 [Source:MGI Symbol;Acc:MGI:3646078]

Location

Chromosome 1: 105,907,080-105,918,002 reverse strand.

About this transcript

This transcript has 4 exons, is associated with 958 variant alleles and maps to 81 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000099843.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000270138.1	Gm7160-207	755	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENSMUST00000270165.1	Gm7160-234	1787	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000188519.4	Gm7160-202	1597	No protein	-	lncRNA	TSL NA: A transcript that was not analysed for TSL. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:NA,
ENSMUST00000270148.1	Gm7160-217	1527	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000270153.1	Gm7160-222	1400	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000270154.1	Gm7160-223	1330	No protein	-	lncRNA	-
ENSMUST00000270156.1	Gm7160-225	1306	No protein	-	lncRNA	-
ENSMUST00000185535.4	Gm7160-201	1201	No protein	-	lncRNA	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENSMUST00000270158.1	Gm7160-227	1187	No protein	-	lncRNA	-
ENSMUST00000270151.1	Gm7160-220	1110	No protein	-	lncRNA	-
ENSMUST00000270164.1	Gm7160-233	1023	No protein	-	lncRNA	-
ENSMUST00000241940.2	Gm7160-203	978	No protein	-	lncRNA	-
ENSMUST00000244951.2	Gm7160-204	978	No protein	-	lncRNA	-
ENSMUST00000270145.1	Gm7160-214	875	No protein	-	lncRNA	-
ENSMUST00000246132.2	Gm7160-206	808	No protein	-	lncRNA	-
ENSMUST00000246006.1	Gm7160-205	801	No protein	-	lncRNA	-
ENSMUST00000270159.1	Gm7160-228	743	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000270146.1	Gm7160-215	728	No protein	-	lncRNA	-
ENSMUST00000270139.1	Gm7160-208	709	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000270142.1	Gm7160-211	680	No protein	-	lncRNA	-
ENSMUST00000270149.1	Gm7160-218	672	No protein	-	lncRNA	-
ENSMUST00000270143.1	Gm7160-212	663	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000270144.1	Gm7160-213	633	No protein	-	lncRNA	-
ENSMUST00000270155.1	Gm7160-224	600	No protein	-	lncRNA	-
ENSMUST00000270141.1	Gm7160-210	580	No protein	-	lncRNA	-
ENSMUST00000270157.1	Gm7160-226	568	No protein	-	lncRNA	-
ENSMUST00000270147.1	Gm7160-216	556	No protein	-	lncRNA	-
ENSMUST00000270162.1	Gm7160-231	556	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000270140.1	Gm7160-209	516	No protein	-	lncRNA	-
ENSMUST00000270161.1	Gm7160-230	506	No protein	-	lncRNA	-
ENSMUST00000270150.1	Gm7160-219	491	No protein	-	lncRNA	-
ENSMUST00000270166.1	Gm7160-235	438	No protein	-	lncRNA	-
ENSMUST00000270160.1	Gm7160-229	412	No protein	-	lncRNA	-
ENSMUST00000270152.1	Gm7160-221	392	No protein	-	lncRNA	-
ENSMUST00000270168.1	Gm7160-237	330	No protein	-	lncRNA	-
ENSMUST00000270163.1	Gm7160-232	320	No protein	-	lncRNA	-
ENSMUST00000270167.1	Gm7160-236	219	No protein	-	lncRNA	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 556 bps,

Version

ENSMUST00000270147.1

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Transcript: ENSMUST00000270147.1 Gm7160-216

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: ENSMUST00000270147.1 Gm7160-216

Summary

About Us

Get help

Our sister sites

Follow us