Transcript: ENSMUST00000238853.2 Etv3l-201

Description

ets variant 3-like [Source:MGI Symbol;Acc:MGI:3646099]

Gene Synonyms

EG546801

Location

Chromosome 3: 87,458,556-87,468,416 forward strand.

About this transcript

This transcript has 6 exons, is annotated with 16 domains and features, is associated with 992 variant alleles and maps to 68 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000118505.2 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000238853.2	Etv3l-201	2111	356aa	ENSMUSP00000159067.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A5F8MPE2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSMUST00000238894.2	Etv3l-202	1797	356aa	ENSMUSP00000158927.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A5F8MPE2	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 6, Coding exons: 5, Transcript length: 2,111 bps, Translation length: 356 residues

Version

ENSMUST00000238853.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

not organism-supported [Definitions]

upstream ATG

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

GENCODE primary gene

This transcript is a member of the Gencode Primary gene set.

Transcript: ENSMUST00000238853.2 Etv3l-201

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: ENSMUST00000238853.2 Etv3l-201

Summary

About Us

Get help

Our sister sites

Follow us