Transcript: ENSMUST00000238437.2 Lhb-202

Description

luteinizing hormone beta [Source:MGI Symbol;Acc:MGI:96782]

Gene Synonyms

Gm29035, LH, leutropin

Location

Chromosome 7: 45,067,796-45,071,060 forward strand.

About this transcript

This transcript has 6 exons, is associated with 598 variant alleles and maps to 130 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000118462.2 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSMUST00000238638.2	Lhb-205	933	310aa	ENSMUSP00000158821.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A571BEL8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSMUST00000238591.2	Lhb-204	2278	310aa	ENSMUSP00000158785.2	Nonsense mediated decay	A0A571BEL8	-
ENSMUST00000238437.2	Lhb-202	778	205aa	ENSMUSP00000158793.2	Nonsense mediated decay	A0A571BEK4	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSMUST00000238581.2	Lhb-203	2501	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 6, Coding exons: 5, Transcript length: 778 bps, Translation length: 205 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSMUST00000238437.2

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

confirm experimentally [Definitions]

Transcript: ENSMUST00000238437.2 Lhb-202

Summary

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Transcript: ENSMUST00000238437.2 Lhb-202

Summary

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