Transcript: ENSMUST00000238010.2 Grpel2-203

Description

GrpE-like 2, mitochondrial [Source:MGI Symbol;Acc:MGI:1334416]

Gene Synonyms

mt-GrpE#2

Location

Chromosome 18: 61,848,082-61,859,396 reverse strand.

About this transcript

This transcript has 4 exons, is annotated with 6 domains and features, is associated with 936 variant alleles and maps to 293 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000024580.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000062991.9	Grpel2-201	4038	224aa	ENSMUSP00000053440.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS29288	O88396 Q0VB85	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000238010.2	Grpel2-203	3960	111aa	ENSMUSP00000158353.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A494BB40	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000237466.2	Grpel2-202	492	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined		-	-

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 3,960 bps, Translation length: 111 residues

Version

ENSMUST00000238010.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000238010.2 Grpel2-203

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Transcript: ENSMUST00000238010.2 Grpel2-203

Summary

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