Transcript: ENSMUST00000236636.2 Plac8l1-202

Description

PLAC8-like 1 [Source:MGI Symbol;Acc:MGI:1916651]

Gene Synonyms

1700009N18Rik, 1700015M15Rik

Location

Chromosome 18: 42,325,503-42,329,774 reverse strand.

About this transcript

This transcript has 2 exons, is annotated with 1 domain and feature, is associated with 834 variant alleles and maps to 85 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000059455.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000081374.4	Plac8l1-201	732	177aa	ENSMUSP00000080111.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS50266	Q08EJ0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000236636.2	Plac8l1-202	486	92aa	ENSMUSP00000158338.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A494BB67	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,

Summary

Statistics

Exons: 2, Coding exons: 2, Transcript length: 486 bps, Translation length: 92 residues

Version

ENSMUST00000236636.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000236636.2 Plac8l1-202

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Transcript: ENSMUST00000236636.2 Plac8l1-202

Summary

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