Transcript: ENSMUST00000234372.2 Meiob-202

Description

meiosis specific with OB domains [Source:MGI Symbol;Acc:MGI:1922428]

Gene Synonyms

4930528F23Rik

Location

Chromosome 17: 25,023,263-25,058,762 forward strand.

About this transcript

This transcript has 13 exons, is annotated with 7 domains and features, is associated with 2732 variant alleles and maps to 153 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000024155.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000024972.7	Meiob-201	1774	470aa	ENSMUSP00000024972.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS50020	Q9D513	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000234372.2	Meiob-202	1665	426aa	ENSMUSP00000157100.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A3Q4EGA1	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000234455.2	Meiob-203	1724	344aa	ENSMUSP00000157038.2	Nonsense mediated decay		A0A3Q4EHK6	-

Summary

Statistics

Exons: 13, Coding exons: 12, Transcript length: 1,665 bps, Translation length: 426 residues

Version

ENSMUST00000234372.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

RNA-Seq supported only [Definitions]

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000234372.2 Meiob-202

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Transcript: ENSMUST00000234372.2 Meiob-202

Summary

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