Transcript: ENSMUST00000233836.2 Vmn2r107-203

Description

vomeronasal 2, receptor 107 [Source:MGI Symbol;Acc:MGI:1316664]

Gene Synonyms

V2r6

Location

Chromosome 17: 20,565,504-20,603,375 forward strand.

About this transcript

This transcript has 6 exons, is annotated with 1 domain and feature, is associated with 3484 variant alleles and maps to 92 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000056910.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000042090.8	Vmn2r107-201	10110	861aa	ENSMUSP00000048706.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS49984	E9PZJ7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000233836.2	Vmn2r107-203	10291	196aa	ENSMUSP00000156773.2	Nonsense mediated decay		A0A3B2W7Y7	-
ENSMUST00000233421.2	Vmn2r107-202	9941	76aa	ENSMUSP00000156595.2	Nonsense mediated decay		A0A3B2WCN1	-

Summary

Statistics

Exons: 6, Coding exons: 2, Transcript length: 10,291 bps, Translation length: 196 residues

Version

ENSMUST00000233836.2

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

inferred transcript model [Definitions]

RNA-Seq supported only

Transcript: ENSMUST00000233836.2 Vmn2r107-203

Summary

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Transcript: ENSMUST00000233836.2 Vmn2r107-203

Summary

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